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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11997145 chr8:27886297 C/G KIAA1967 chr8:22462257-22477981:+ -0.74 -6.93 1.85E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G MCPH1 chr8:6264113-6506025:+ -0.72 -6.64 1.07E-10 Box Plot
BLCA rs11997145 chr8:27886297 C/G PCM1 chr8:17780349-17887453:+ -0.64 -6.47 3.03E-10 Box Plot
BLCA rs11997145 chr8:27886297 C/G POLR3D chr8:22102617-22112113:+ -0.69 -6.81 3.82E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G PPP2R2A chr8:26149007-26230196:+ -0.65 -6.49 2.73E-10 Box Plot
BLCA rs11997145 chr8:27886297 C/G R3HCC1 chr8:23127633-23153792:+ -0.69 -7.15 4.52E-12 Box Plot
BLCA rs11997145 chr8:27886297 C/G SLC39A14 chr8:22224762-22291642:+ -0.43 -6.05 3.5E-9 Box Plot
BLCA rs11997145 chr8:27886297 C/G TNKS chr8:9413424-9639856:+ -0.59 -6.73 6.26E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G XPO7 chr8:21777182-21864096:+ -0.72 -6.79 4.37E-11 Box Plot
BLCA rs11998046 chr8:21411631 C/T CCDC25 chr8:27590828-27630170:- 0.88 6.49 2.58E-10 Box Plot
BLCA rs11998046 chr8:21411631 C/T CHMP7 chr8:23101150-23119513:+ 0.83 6.49 2.7E-10 Box Plot
BLCA rs11998046 chr8:21411631 C/T ELP3 chr8:27947190-28048673:+ 0.87 6.3 8.41E-10 Box Plot
BLCA rs11998046 chr8:21411631 C/T INTS10 chr8:19674651-19709594:+ 0.79 6.07 3.13E-9 Box Plot
BLCA rs11998046 chr8:21411631 C/T KIAA1967 chr8:22462257-22477981:+ 0.83 6.19 1.54E-9 Box Plot
BLCA rs12001858 chr9:125037623 A/G C9orf80 chr9:115448793-115480387:- 0.54 6.13 2.17E-9 Box Plot